| # Git and version control | |
| .git/ | |
| .gitignore | |
| .gitmodules | |
| .github/ | |
| # Python cache | |
| __pycache__/ | |
| *.py[cod] | |
| *$py.class | |
| *.so | |
| .Python | |
| # Environment files - DO NOT INCLUDE IN DOCKER IMAGE | |
| .env | |
| .env.local | |
| .env.*.local | |
| *.env | |
| venv/ | |
| env/ | |
| ENV/ | |
| # IDE | |
| .vscode/ | |
| .idea/ | |
| *.sublime-project | |
| *.sublime-workspace | |
| # Research code (not needed for production) | |
| ograg2-1/ | |
| ComputerVisionBackend/ | |
| # Large generated/cached files - NOT needed in Docker | |
| *.npz | |
| plant_hypernodes_with_embeddings.json | |
| import_hypernodes.sql | |
| # Logs and temporary files | |
| *.log | |
| *.tmp | |
| *.temp | |
| *.bak | |
| *.swp | |
| logs/ | |
| build_hypergraph*.log | |
| # Test files | |
| tests/ | |
| test_*.py | |
| *.ipynb | |
| .ipynb_checkpoints/ | |
| # Database | |
| *.db | |
| *.sqlite | |
| *.sqlite3 | |
| # OS files | |
| .DS_Store | |
| Thumbs.db | |
| Desktop.ini | |
| # Build artifacts | |
| build/ | |
| dist/ | |
| *.egg-info/ | |
| # Large CSV files (already processed into JSON) | |
| *.csv | |
| # Documentation (keep only essential) | |
| *.md | |
| !README_HF.md | |
| # SQL scripts (not needed at runtime) | |
| *.sql | |
| # Sample data | |
| sample_structure.json | |
| analysis_output.txt | |
| # Weird files | |
| =13.0 | |
| # Force rebuild | |